Publications

  1. Yuan, W.P., S.L. Liu, W.C. Cai, W.D. Dong, J. Chen, M.A. Arain, P.B. Blanken, A.C. Cescatti, W.G. Georg, T.G. Georgiadis, L.G. Genesio, D.G. Gianelle, A.G. Grelle, G.K. Kiely, A.K. Knohl, D.L. Liu, M.M. Marek, L.M. Merbold, L.M. Montagnani, O.P. Panferov, M.P. Peltoniemi, S.R. Rambal, A.R. Raschi, A.V. Varlagin, and J.X. Xia. 2014. Vegetation-specific model parameters are not required for estimating gross primary production? Ecological Modeling, 292(24): 1–10. doi:10.1016/j.ecolmodel.2014.08.017

  2. Yuan W.P., Cai W., Xia, J., Chen J., Liu S., Dong W., Merbold L., Law B., Arain A., Beringer J., Bernhofer J., Black A., Blanken P.D., Cescatti A., Chen Y., Francois L., Gianelle D., Janssen I.A., Jung M., Kato T, Kiely G., Liu D., Marcolla B., Montagnani L., Raschi A., Roupsard O., Varlagin A., Wohlfahrt G., 2014. Global comparison of light use efficiency models for simulatingterrestrial vegetation gross primary production based on the LaThuiledatabase. Agricultural and Forest Meteorology 192–193 (2014) 108–120. http://dx.doi.org/10.1016/j.agrformet.2014.03.007

  3. He , Chen J.M, Liu J., Mo G., Bélair S., Zheng T., Wang R., Chen B., Croft H., Arain M.A., and Barr A.G., 2014. Optimization of water uptake and photosynthetic parameters in an ecosystem model using tower flux data. Ecological Modelling 294: 94–104. http://dx.doi.org/10.1016/j.ecolmodel.2014.09.019

  4. Chang K-H., Warland J.S., Bartlett P.A., Arain M.A., and Yuan F, 2014. A simple crop phenology algorithm improves the carbon cycle simulation in land surface model: CN-CLASS. Agronomy Journal, 106: 297–308. doi:10.2134/agronj2013.0164.

  5. Xiao, J., S. V. Ollinger, S. Frolking, G. C. Hurtt, D. Y. Hollinger, K. J. Davis, Y. Pan, X. Zhang, F. Deng, J. Chen, D. D. Baldocchi, B. E. Law, A. Arain, A. R. Desai, A. D. Richardson, G. Sun, B. Amiro, H. Margolis, L. Gu, R. L. Scott, P. D. Blanken, and A. E. Suyker. 2014. Data-driven diagnostics of terrestrial carbon dynamics over North America. Agricultural and Forest Meteorology 197:142-157.

  6. Kasurinen, V.; Alfredsen, K.; Kolari, P.; Mammarella, I.; Alekseychik, P.; Rinne, J.; Vesala, T.; Bernier, P.; Boike, J.; Langer, M.; Marchesini, L.B.; van Huissteden, K.; Dolman, H.; Sachs, T.; Ohta, T.; Varlagin, A.; Rocha, A.; Arain, A.; Oechel, W.; Lund, M.; Grelle, A.; Lindroth, A.; Black, A.; Aurela, M.; Laurila, T.; Lohila, A.; Berninger, F., 2014. Latent heat exchange in the boreal and arctic biomes. Global Change Biol., 20(11), 3439-3456.

  7. Peichl M., Arain A. M., Moore T. R., Brodeur J. J., Khomik M., Ullah S., Restrepo-Coupé N., McLaren J., and Pejam M. R., 2014. Carbon and greenhouse gas balances in an age sequence of temperate pine plantations. Biogeosciences, 11: 1–12, 2014. doi:10.5194/bg-11-1-2014

  8. Camino-Serrano M., Gielen B., Luyssaert S., Ciais P., Vicca S.,Guenet B., De Vos B., Cools N., Ahrens B., Arain M.A., Borken W., Clarke N., Clarkson B., Cummins T., Don A., Pannatier E.G., Laudon H., Moore T., Nieminen T.M, Nilsson M.B., Peichl M., Schwendenmann L., Siemens J., and Janssens I., 2014. Linking variability in soil solution dissolved organic carbon to climate, soil type, and vegetation type. Global Biogeochemical Cycles, 25(5):  497–509.

  9. Wu H, Peng C., Moore T.R., Hua D., Li C., Zhu Q., Peichl M., Arain M.A., and Guo1 Z., 2014. Modeling dissolved organic carbon in temperate forest soils: TRIPLEX-DOC model development and validation. Geoscientific Model Development, 7:867-881.

  10. Mallick K., Jarvis A.J., Boegh E., Fisher J.B., Drewrya D.T., Tu K.P., Hook S.J., Hulley G., Ardö J., Beringer J., Arain A., Niyogi D., 2014. A Surface Temperature Initiated Closure (STIC) for surface energy balance fluxes. Remote Sensing of Environment 141: 243–261. doi.org/10.1016/j.rse.2013.10.022.

  11. Fisher, J. B., Sikka, M., Oechel, W. C., Huntzinger, D. N., Melton, J. R., Koven, C. D., Ahlström, A., Arain, A.M., Baker, I., Chen, J. M., Ciais, P., Davidson, C., Dietze, M., El-Masri, B., Hayes, D., Huntingford, C., Jain, A., Levy, P. E., Lomas, M. R., Poulter, B., Price, D., Sahoo, A. K., Schaefer, K., Tian, H., Tomelleri, E., Verbeeck, H., Viovy, N., Wania, R., Zeng, N., and Miller, C. E., 2014: Carbon cycle uncertainty in the Alaskan Arctic, Biogeosciences Discuss., 11, 2887-2932, doi:10.5194/bgd-11-2887-2014.

  12. Christoffersen BO, Restrepo-Coupe N, Arain MA, Baker IT, Cestaro BP, Ciais P, Fisher JB, Galbraith D, Guan X, Gulden L, van den Hurk B, Ichii K, Imbuzeiro H, Jain A, Levine N, Miguez-Macho G, Poulter B, Roberti DR, Sakaguchi K, Sahoo A, Schaefer K, Shi M, Verbeeck H, Yang Z-L, Araújo AC, Kruijt B, Manzi AO, da Rocha HR, von Randow C, Muza MN, Borak J, Costa MH, Gonçalves de Gonçalves LG, Zeng X, Saleska SR. 2014. Mechanisms of water supply and vegetation demand govern the seasonality and magnitude of evapotranspiration in Amazonia and Cerrado. Agricultural and Forest Meteorology 191(0): 33-50.

  13. Vicca, S; Bahn, M; Estiarte, M; Alberti, G; Ambus, P; Arain, MA; Beier, C; Bentley, L; Borken, W; Buchmann, N; Collins, S; de Dato, G; Dukes, J; Escolar, C; Fay, P; Guidolotti, G; Hanson, P; Kahmen, A; Kroel-Dulay, G; Ladreiter-Knauss, T; Larsen, K; Lellei-Kovacs, E; Lebrija-Trejos, E; Maestre, FT; Marhan, S; Marshall, M; Meir, P; Miao, Y; Muhr, J; Niklaus, P; Ogaya, R; Penuelas, J; Poll, C; Rustad, L; Savage, K; Schindlbacher, A; Schmidt, IK; Smith, A; Sotta, E; Suseela, V; Tietema, A; van Gestel, N; van Loon, EE; van Straaten, O; Vargas, R; Wan, S; Weber, U; Janssens, I: 2014. Can current moisture responses of soil respiration be extrapolated into the future? A synthesis of precipitation manipulation experiments, Biogeosciences, 11, 2991-3013, doi:10.5194/bg-11-2991-2014

  14. Zha, T.S., A.G. Barr, P.-Y. Bernier, M.B. Lavigne, J.A. Trofymow, B.D. Amiro, A.Arain, J.S. Bhatti, T.A. Black, H.A. Margolis, J.H. McCaughey, Z.S. Xing, K.C.J. Van Rees, C. Coursolle, 2013. Gross and aboveground net primary production at Canadian forest carbon flux sites. Agricultural and Forest Meteorology 174-175: 54-64. doi.org/10.1016/j.agrformet.2013.02.004.

  15. Goncalves, L.G.G., Borak, J.S., Costa, M.H., Saleska, S.R., Baker, I., Restrepo-Coupe,N., Muza, M.N., Poulter, B., Verbeeck, H., Fisher, J.B., Arain, M.A., Arkin, P., Ces-taro, B.P., Christoffersen, B., Galbraith, D., Guan, X., van den Hurk, B.J.J.M., Ichii,K., Imbuzeiro, H.M.A., Jain, A.K., Levine, N., Lu, C., Miguez-Macho, G., Roberti,D.R., Sahoo, A., Sakaguchi, K., Schaefer, K., Shi, M., Shuttleworth, W.J., Tian, H.,Yang, Z.-L., Zeng, X., 2013. Overview of the Large-Scale Biosphere–Atmosphere Experiment in Amazonia Data Model Intercomparison Project (LBA-DMIP). Agricultural and Forest Meteorology, 182– 183 (2013) 111–127. doi.org/10.1016/j.agrformet.2013.04.030

  16. von Randow C; Zeri M; Restrepo-Coupe N; Muza MN; de Gonçalves LGG; Costa MH; Imbuzeiro H; Araujo AC; Manzi AO; da Rocha HR; Cestaro BP; Saleska SR; Christoffersen B; Arain MA; Baker IT; Ciais P; Poulter B; Fisher JB; Galbraith D; Guan X; Shi M; Yang Z-L; van den Hurk B; Ichii K; Jain A; Levine N; Miguez-Macho G; Roberti DR; Sahoo A; Schaefer K; Tian H; Verbeeck H., 2013. Inter-annual variability of carbon and water fluxes in Amazonian forest, Cerrado and pasture sites, as simulated by terrestrial biosphere models, Agricultural and Forest Meteorology, 182-183, 145-155. doi: 10.1016/j.agrformet.2013.05.015

  17. Chen B, Arain MA, Khomik M, Trofymow A, Grant R.F., Kurz WA, Yeluripati J, Wang Z, 2013.   Evaluating the impacts of disturbance regimes and climate variability on the historic carbon budget of a Pacific Northwestern Forest Landscape. Agricultural and Forest Meteorology, 180: 265-280.

  18. Wang, Z. R. F Grant, Arain, P. Bernier, B. Chen, J. M. Chen, A. Govind, L. Guindon, W. A Kurz, C Peng, D. T. Price, G. Stinson; J. Sun, J. A. Trofymow, J. Yeluripati, 2013. Incorporating weather sensitivity in inventory-based estimates of boreal forest productivity: a meta-analysis of process model results. Ecological Modeling, 260(0): 25-35. doi.org/10.1016/j.ecolmodel.2013.03.016.

  19. Chevallier, F., Wang T., Ciais C., Maignan F., Bocquet M., Arain A., Cescatti A., Chen J., Dolman A.J., Law B.E., Margolis H., Montagnani L., Moors E., 2013. What eddy-covariance measurements tell us about prior land flux errors in CO2-flux inversion schemes, Global Biogeochemical Cycles, 26; GB1021. doi:10.1029/2010GB003974.

  20. Ricciuto, D.M., K. Schaefer, P.E. Thornton, K. Davis, R.B. Cook, Shishi Liu, R. Anderson, A. Arain, I. Baker, J.M. Chen, M. Dietze, R. Grant, C. Izaurralde, A.K. Jain, A.W. King, C. Kucharik, Shuguang Liu, E. Lokupitiya, Y. Luo, C. Peng, B. Poulter, D. Price, W. Riley, A. Sahoo, H. Tian, C. Tonitto, and H. Verbeeck. 2013. NACP Site: Terrestrial Biosphere Model and Aggregated Flux Data in Standard Format. Data set. Available on-line [http://daac.ornl.gov] from Oak Ridge National Laboratory Distributed Active Archive Center, Oak Ridge, Tennessee, USA. http://dx.doi.org/10.3334/ORNLDAAC/1183

  21. Ricciuto, D.M., K. Schaefer, P.E. Thornton, R.B. Cook, R. Anderson, A. Arain, I. Baker, J.M. Chen, M. Dietze, R. Grant, C. Izaurralde, A.K. Jain, A.W. King, C. Kucharik, S. Liu, E. Lokupitiya, Y. Luo, C. Peng, B. Poulter, D. Price, W. Riley, A. Sahoo, H. Tian, C. Tonitto, and H. Verbeeck. 2013. NACP Site: Terrestrial Biosphere Model Output Data in Original Format. Data set. Available on-line [http://daac.ornl.gov] from Oak Ridge National Laboratory Distributed Active Archive Center, Oak Ridge, Tennessee, USA. http://dx.doi.org/10.3334/ORNLDAAC/1192

  22. Barr, A.G., D.M. Ricciuto, K. Schaefer, A. Richardson, D. Agarwal, P.E. Thornton, K. Davis, B. Jackson, R.B. Cook, D.Y. Hollinger, C. van Ingen, B. Amiro, A. Andrews, A. Arain, D. Baldocchi, T.A. Black, P. Bolstad, P. Curtis, A. Desai, D. Dragoni, L. Flanagan, L. Gu, G. Katul, B.E. Law, P. Lafleur, H. Margolis, R. Matamala, T. Meyers, H. McCaughey, R. Monson, J.W. Munger, W. Oechel, R. Oren, N. Roulet, M. Torn, and S. Verma. 2013. NACP Site: Tower Meteorology, Flux Observations with Uncertainty, and Ancillary Data. Data set. Available on-line [http://daac.ornl.gov] from Oak Ridge National Laboratory Distributed Active Archive Center, Oak Ridge, Tennessee, USA http://dx. doi.org/10.3334/ORNLDAAC/1178

  23. Barr A.G., Richardson A.D., Hollinger D.Y., Papale D., Arain M.A., Black T.A., Bohrer G., Dragoni D., Fischer M.L., Gu L., Law B.E., Margolis H.A., McCaughey J.H., Munger J.W., Oechel W., Schaeffer K.., 2013. Use of change-point detection for friction–velocity threshold evaluation in eddy-covariance studies. Agricultural and Forest Meteorology 171-172, 31-45. doi.org/10.1016/j.agrformet.2012.11.023.

  24. Stoy, P. C., Dietze, M. C., Richardson, A. D., Vargas, R., Barr, A. G., Anderson, R. S., Arain, M. A., Baker, I. T., Black, T. A., Chen, J. M., Cook, R. B., Gough, C. M., Grant, R. F., Hollinger, D. Y., Izaurralde, R. C., Kucharik, C. J., Lafleur, P., Law, B. E., Liu, S., Lokupitiya, E., Luo, Y., Munger, J. W., Peng, C., Poulter, B., Price, D. T., Ricciuto, D. M., Riley, W. J., Sahoo, A. K., Schaefer, K., Schwalm, C. R., Tian, H., Verbeeck, H., and Weng, E., 2013. Evaluating the agreement between measurements and models of net ecosystem exchange at different times and timescales using wavelet coherence: an example using data from the North American Carbon Program Site-Level Interim Synthesis. Biogeosciences, 10: 6893-6909, doi:10.5194/bg-10-6893-2013.

  25. Stoy, P; Mauder, M; Foken, T; Marcolla, B; Boegh, E; Ibrom, A; Arain, MA; Arneth, A; Aurela, M; Bernhofer, C; Cescatti, A; Dellwik, E; Duce, P; Gianelle, D; van Gorsel, E; Kiely, G; Knohl, A; Mangolis, H; McCaughey, H; Merbold, L; Montagnani, L; Papale, D; Reichstein, M; Serrano-Ortiz, P; Sottocornola, M; Saunders, M; Spano, D; Vaccari, F; Varlagin, A: 2013. A data-driven analysis of energy balance closure across FLUXNET research sites: The role of landscape-scale heterogeneity, Agricultural and Forest Meteorology, 171-172: 137-152.

  26. MacKay S.L., Arain M.A., Khomik M., Brodeur J.J., Schumacher J., Hartmann H., and Peichl M., 2012. The impact of induced drought on transpiration and growth in a temperate pine plantation forest. Hydrological Processes. 26(12), 1779-1791. doi: 10.1002/hyp.9315.

  27. Niu, S., Luo Y., Fei S., Yuan W., Schimel D., Law B.E., Ammann C., Arain M.A.,  et al., Thermal optimality of net ecosystem exchange of carbon dioxide and underlying mechanisms. New Phytologist, 194(3), 775-783, doi:10.1111/j.1469-8137.2012.04095.x.

  28. Jung, M., Reichstein M., Cescatti A., Richardson A.D., Margolis H., Arain M.A., Arneth A., Bonal D., Chen J., Gianelle D., Gobron N., Kier G., Kutsch W., Lasslop G., Law B.L., Lindroth A., Merbold L., Montagnani L., Moors E.J., Papale D., Sottocornola M., Vaccari F., Williams C., 2012. Correction to “Global patterns of land-atmosphere fluxes of carbon dioxide, latent heat, and sensible heat derived from eddy covariance, satellite, and meteorological observations”, Journal of Geophysical Research, 117, G04011, doi:10.1029/2012JG002190.

  29. Schaefer, K., Schwalm C.R., Williams C., Arain M.A., Barr A., Chen J.M., Davis K.J., et al., A model-data comparison of gross primary productivity: Results from the North American Carbon Program site synthesis, Journal of Geophysical Research, 117, G03010, doi:10.1029/2012JG001960.

  30. Chen, B., Coops, N.C., Fu, D., Margolis, H.A., Amiro, B.D., Black, T.A., Arain, M.A., Barr, A.G., Bourque, C.P.-A., Flanagan, L.B., Lafleur, P.M., McCaughey, J.H., and Wofsy, S.C.  2012.  Characterizing spatial representativeness of flux tower eddy-covariance measurements across the Canadian Carbon Program Network using remote sensing and footprint analysis.  Remote Sensing of the Environment, 124: 742-755.

  31. Coursolle, C.; Margolis, H.A.; Giasson, M.-A.; Bernier, P.-Y.; Amiro, B.D.; Arain, M.A.; Barr, A.G.; Black, T.A.; Goulden, M.L.; McCaughey, J.H.; Chen, J.M.; Dunn, A.L.; Grant, R.F.; Lafleur, P.M. 2012. Influence of stand age on the magnitude and seasonality of carbon fluxes in Canadian forests. Agricultural and Forest Meteorology, 165:136-148.

  32. Wang T., Brender P. Ciais P., Piao S., Mahecha M.D., Chevallier F., Reichstein M., Ottlé C., Maignan F.,  Arain A., Bohrer G., Cescatti A., Kiely G., Law B.E., Lutz M., Montagnani L.,  Moors I.E., Osborne B., Panferov O., Papale D., Vaccari F.P., 2012. State-dependent errors in a land surface model across biomes inferred from eddy covariance observations on multiple timescales. Ecological Modelling, 246: 11–25. doi: 10.1016/j.ecolmodel.2012.07.017

  33. Wu C., Chen J.M., Desai A.R., Hollinger D.Y., Arain M.A., Margolis H.A., Gough C.M., Staebler R.M., 2012. Remote sensing of canopy light use efficiency in temperate and boreal forests of North America using MODIS imagery. Remote Sensing of Environment. 118: 60– doi:10.1016/j.rse.2011.11.012.

  34. Brümmer C., Black T.A., Jassal R.S., Grant N.J., Spittlehouse D.L., Chen B., Nesic Z., Amiro B.D., Arain M.A., Barr A.G., Bourque C.P-A., Coursolle C., Dunn A,L., Flanagan L.B., Humphreys E.R., Lafleur P.M., Margolis H.A., McCaughey H., Wofsy S.C., 2012. How climate and vegetation type influence evapotranspiration and water use efficiency in Canadian forest, peatland and grassland ecosystems. Agricultural and Forest Meteorology, 153: 14–30.

  35. Richardson A.D. Anderson R.S., Arain M.A., Barr A.G., Bohrer G., Chen G., Chen J.M., Ciais P., Davis K.J., Desai A.R., Dietze M.C., Dragoni D., Maayar M.E., Garrity S., Gough C.M., Grant R., Hollinger D.Y., Margolis H.A., McCaughey H., Migliavacca M., Monson R.K., Munger J.W., Poulter J., Raczka B.M., Ricciuto D.M., Sahoo A.K., Schaefer K., Tian H., Vargas ., Verbeeck H., Xiao J., Xue Y., 2012. Terrestrial biosphere models need better representation of vegetation phenology: Results from the North American Carbon Program Site Synthesis. Global Change Biology. 18: 566–584. doi: 10.1111/j.1365-2486.2011.02562.x.

  36. Jung M., Reichstein M., Cescatti A., Richardson A.D., Margolis H., Arain M.A., Arneth A., Bonal D., Chen J., Gianelle D., Gobron N., Kier G., Kutsch W., Lasslop G., Law B.L., Lindroth A., Merbold L., Montagnani L., Moors E.J., Papale D., Sottocornola M., Vaccari F., Williams C., 2011. Global patterns of land-atmosphere fluxes of carbon dioxide, latent heat, and sensible heat derived from eddy covariance, satellite, and meteorological observations. Journal of Geophysical Research – Biogeosciences. 116, G00J07, doi:10.1029/2010JG001566.

  37. Mahecha M.D., Reichstein M., Carvalhais N., Lasslop G., Lange H., Seneviratne S.I., Vargas R., Ammann C., Arain M.A., Cescatti A., Janssens I.A., Migliavacca M., Montagnani L., Richardson A.D., 2011. Response to comment on “Global cnvergence in the temperature sensitivity of respiration at ecosystem level. Science 331, 1265. doi: 10.1126/science.1197033.

  38. Dietze M., Richardson A.D., Vargas R., Barr A.G., Anderson R.S., Arain M.A., Baker I.T., Black T.A., Chen J.M., Cook B., Flanagan L.B., Gough C.M., Grant R.F., Hollinger D., Izaurralde C., Kucharik C.J., Lafleur P., Liu S., Lokupitiya E., Luo Y., Munger J.M., Peng C., Poulter B., Price D.T. Ricciuto D.M., Riley W.J., Sahoo A.K., Schaefer K., Schwalm C.R., Tian H., Verbeeck H., Verma S.B., 2011. Characterizing the performance of ecosystem models across time scales: A spectral analysis of the North American Carbon Program site-level synthesis. Journal of Geophysical Research – Biogeosciences. 116, G04029. doi:10.1029/2011JG001661.

  39. Migliavacca M, Reichstein M., Richardson A.D., Colombo R., Sutton M.A., Lasslop G., Wohlfahrt G., Tomelleri E., Carvalhais N., Cescatti A., Mahecha M.D., Montagnani L., Papale D., Zaehle S., Arain M.A., Arneth A., Black T.A., Carrara A., Dore S., Gianelle D., Helfter C., Hollinger D., Kutsch W.L., Lafleur P.L., Nouvellon Y., Rebmann C., Rocha H.R., Rodeghiero M., Roupsard O., Sebastià M-T., Seufert G., Soussana J-F., van der Molen M-K., 2011. Semi-empirical modeling of abiotic and biotic factors controlling ecosystem respiration across eddy covariance sites. Global Change Biology. 17: 390-409. DOI: 10.1111/j.1365-2486.2010.02243.x

  40. Wang T., Ciais P., Piao S., Ottle C., Maignan F., Arain A., Cescatti S., Gianelle D., Gough C., Gu L., Lafleur P., Laurila T., Marcolla B., Margolis H., Montagnani L., Moors E., Saigusa N., Vesala T., Wohlfahrt G., Koven C., Black A., Dellwik E., Don A., Hollinger D., Knohl A., Monson R.., Munger J., Suyker  , Varlagin A., 2011. Controls on winter ecosystem respiration in temperate and boreal ecosystems. Biogeosciences, 8: 2009-2025. doi:10.5194/bg-8-2009-2011.

  41. Beckerman B.S., Jerrett M., 1. Finkelstein M., Kanaroglou P., Brook J.R., Arain M.A., Sears M.R., Stieb D., Balmes J., Chapman K. 2012. The association between chronic exposure to traffic-related air pollution and ischemic heart disease. Journal of Toxicology and Environmental Health. 75(7):402-11. doi: 10.1080/15287394.2012.670899.

  42. Huang S., Arain M.A., Arora V.K., Brodeur J.J, Peichl M., 2011. Analysis of nitrogen controls on carbon and water exchanges in a conifer forest using the CLASS-CTEMN+ model. Ecological Modelling, 222: 3743– 3760. doi:10.1016/j.ecolmodel.2011.09.008.

  43. Wang Z.,Grant R.F., Arain M.A., Chen B., Coops N., Hember R., Kurz W.A., Price D.T., Stinson G., Trofymow J.A., Yeluripati J., and Chen B.Z., 2011. Evaluating weather effects on interannual variation in net ecosystem productivity of a coastal temperate forest landscape: a model intercomparison. Ecological Modelling. 222: 3236– 3249. doi:10.1016/j.ecolmodel.2011.06.005.

  44. Yuan W., Luo Y., Liang S., Yu G., Niu S., Stoy P., Chen J., Desai A.R., Lindroth A., Gough C., Ceulemans R., Arain A., Bernhofer C., Cook B., Cook D.R., Dragoni D., Gielen B., Janssens I.A., Longdoz B., Liu H., Lund M., Matteucci G., Moors E., Scott R.L Seufert G., Varner R., 2011. Thermal adaptation of net ecosystem exchange. Biogeosciences, 8: 1453–1463. doi:10.5194/bg-8-1453-2011.

  45. Yi C., Ricciuto D., Li R., Wolbeck J., Xu X., Nilsson M., Aires L., Albertson J.D., Ammann C., Arain M.A., et al., (2010). Climate control of terrestrial carbon exchange across biomes and continents. Environmental Research Letters, 5: 034007, doi:10.1088/1748-9326/5/3/034007.

  46. Schwalm, C. R., Williams C.A., Schaefer K., Anderson R., Arain M.A., Baker I., Barr A., Black T.A., Chen G., Chen J.M., Ciais P., Davis K.J., Desai A., Dietze M., Dragoni D., Fischer M.L., Flanagan L.B., Grant R., Gu L., Hollinger D., Izaurralde R.C., Kucharik C., Lafleur P., Law B.E., Li L., Li Z., Liu S., Lokupitiya E., Luo Y., Ma S., Margolis H., McCaughey H., Monson R.K., Oechel W.C., Peng C., Poulter B., Price D.T., Riciutto D.M., Riley W., Sahoo A.K., Sprintsin M., Sun J., Tian H., Tonitto C., Verbeeck H., Verma S.B., (2010), A model-data intercomparison of CO2 exchange across North America: Results from the North American Carbon Program site synthesis, Journal of Geophysical Research – Biogeosciences, 115, G00H05, doi:10.1029/2009JG001229.

  47. Beer C., Reichstein M., Tomelleri E., Ciais P., Jung M., Carvalhais N., Rodenbeck C., Arain M.A., Baldocchi D., Bonan G.B., Bondeau A., Cescatti A., Lasslop G., Lindroth L., Lomas M., Luyssaert S., Margolis H., Oleson K.W., Roupsard O., Veenendaal E., Viovy N., Williams C., Woodward F.I., Papale D., 2010. Terrestrial gross carbon dioxide uptake: Global distribution and co-variation with climate. Science, 329, 834, DOI: 10.1126/science.1184984.

  48. Mahecha M.D., Reichstein M., Carvalhais N., Lasslop G., Lange H., Seneviratne S.I., Vargas R., Ammann C., Arain M.A., Cescatti A., Janssens I.A., Migliavacca M., Montagnani L., Richardson A.D., 2010. Global convergence in the temperature sensitivity of respiration at ecosystem level. Science, 329, 838, DOI: 10.1126/science.1189587.

  49. Khomik M., Arain M.A., Brodeur J.J., Peichl M., Restrepo-Coupé N., McLaren J.D., 2010. Relative contribution of soil, foliar and woody tissue respiration to total ecosystem respiration in four pine forests of different ages. Journal of Geophysical Research – Biogeosciences 115, G03024, doi:10.1029/2009JG001089.

  50. Peichl M., Brodeur J.J., Khomik M., Arain M.A., Biometric and eddy-covariance based estimates of carbon fluxes in an age-sequence of temperate pine forests. Agricultural and Forest Meteorology,150:952-965, doi:10.1016/j.agrformet.2010.03.002

  51. Peichl M., Arain M.A., Brodeur J.J., 2010b. Age effects on carbon fluxes in temperate pine forests. Agricultural and Forest Meteorology, 150: 1090–1101, doi:10.1016/j.agrformet.2010.04.008.

  52. Chen B., Coops N.C., Fu D., Margolis H.A., Amiro B.D., Barr A.G., Black T.A., Arain M.A., Bourque C.P.-A., Flanagan L.B., Lafleur P.M., McCaughey J.H., Wofsy S.C., 2010. Assessing eddy-covariance flux tower location bias across the Fluxnet-Canada Research Network based on remote sensing and footprint modeling. doi:10.1016/j.agrformet.2010.09.005.

  53. Su J.G., Jerrett M., Beckerman B., Verma D., Arain M.A., Kanaroglou P., Stieb D., Finkelstein M., Brook J., 2010. A land use regression model for predicting ambient volatile organic compound concentrations in Toronto, Canada. Atmospheric Environment 44: 3529-3537; doi:10.1016/j.atmosenv.2010.06.015.

  54. Binod N., Jerrett M., Burnett R.T., Marrie T., Arain M.A., and Loeb M., 2010. Long-term exposure to ambient air pollution and risk of hospitalization with community-acquired pneumonia in older adults. American Journal of Respiratory and Critical Care 181: 47–53. doi: 10.1164/rccm.200901-0160oc.

  55. Peichl M., Arain M.A., Ullah S., Moore T., 2010. Carbon dioxide, methane, and nitrous oxide exchanges in an age-sequence of temperate pine forests. Global Change Biology 16: 2198–2212, doi: 10.1111/j.1365-2486.2009.02066.x

  56. Arain M.A., Balir R., Finkelstein N., Brook J. and Jerrett M., 2009. Meteorological Influences on the Spatial and Temporal Variability of NO2 in Toronto and Hamilton, Ontario, Canada. Canadian Geographer, 53:2, 165-190.

  57. Khomik, M., M. A. Arain, K. Liaw, and J. H. McCaughey, 2009. Debut of a flexible model for simulating soil respiration–soil temperature relationship: Gamma model, J. Geophys. Res., 114, G03004, doi:10.1029/2008JG000851.

  58. Sahsuvaroglu T., Jerrett M., Sears M.R., McConnell R., Finkelstein N., Arain M.A.., Newbold B., Burnett R., 2009. Spatial analysis of air pollution and childhood asthma in Hamilton, Canada: comparing exposure methods in sensitive subgroups. Environmental Health 2009, 8:14 doi:10.1186/1476-069X-8-14.

  59. Jerrett M., Finkelstein M.M., Brook J.R., Arain M.A., Kanaroglou P., Stieb D.M., Gilbert N.L., Verma D., Finkelstein N., Chapman K.R., Sears M.R., 2009. A Cohort Study of Traffic-related Air Pollution and Mortality in Toronto, Canada. Environmental Health Perspective. doi:10.1289/ehp.11533.

  60. McLaren, J. D., Arain M.A., Khomik M., Peichl M., and Brodeur J., 2008. Water flux components and soil water-atmospheric controls in a temperate pine forest growing in a well-drained sandy soil, Journal of Geophysical Research – Biogeosciences, 113: G04031, doi:10.1029/2007JG000653.

  61. Yuan F., Arain M.A., Barr A., Black T.A., Bourque P.-A., Coursolle C., Margolis H., McCaughey H., and Wofsy S. C., 2008. Modeling analysis of primary controls on net ecosystem productivity of seven boreal and temperate coniferous forests across an east-west continental transect in Canada. Global Change Biology, 14: 1–20, doi: 10.1111/j.1365-2486.2008.01612.x.

  62. Beckerman B., Jerrett M., Brook J. Verma D., Arain M. A., Finkelstein M., 2008. Correlation of nitrogen dioxide to other traffic pollutants near a major expressway. Atmospheric Environment, 42: 275–290. doi:10.1016/j.atmosenv.2007.09.042.

  63. Peichl, M., Moore, T., Arain, M.A., Dalva, M., Brodkey, D., and J. McLaren, 2007. Concentrations and fluxes of dissolved organic carbon in an age-sequence of white pine forests in southern Ontario, Canada. Biogeochemistry, 86: 1–17. doi:10.1007/s10533-007-9138-7.

  64. Peichl M., and Arain M.A., Allometry and partitioning of above- and belowground tree biomass in an age-sequence of white pine forests. Forest Ecology and Management, 253: 68–80. doi:10.1016/j.foreco.2007.07.003.

  65. Yi S., Woo M.K. and Arain M.A., 2007. Impact of peat and vegetation on permafrost degradation under climate warming. Geophysical Research Letters 34, L16504, doi:10.1029/2007GL030550.

  66. Arain M.A., Blair R., Finkelstein N., Brook J.R., Sahsuvaroglu T., Beckerman B., Zhang L., and Jerrett M., 2007. The use of wind fields to improve empirical chronic air pollution exposure models. Atmospheric Environment, 41:3453–3464.

  67. Owen K.E, J. Tenhunen, M. Reichstein, Q. Wang, E. Falge, R. Geyer, X. Xiao, P. Stoy, C. Ammann, A. Arain, M. Aubinet, M. Aurela, C. Bernhofer, B. Chojnicki, A. Granier, T. Gruenwald, J. Hadley, B. Heinesch, D. Hollinger, A. Knohl, W. Kutsch, A. Lohila, T. Meyers, E. Moors, C. Moureaux, K. Pilegaard, N. Saigusa, S. Verma, T. Vesala, and C. Vogel, 2007. Linking flux network measurements to continental scale simulations: ecosystem CO2 exchange capacity under non-water-stressed conditions. Global Change Biology, 13: 734–760, doi: 10.1111/j.1365-2486.2007.01326.x.

  68. Yuan, F. Arain M.A., Black T.A., Morgenstern K., 2007. Energy and water exchanges modulated by soil-plant nitrogen cycling in a temperate Pacific Northwest conifer forest. Ecological Modeling, 210: 31-347.

  69. Jerrett, M., Arain, M.A., Kanaroglou, P., Beckerman, B., Crouse, D., Gilbert, N.L., Brook, J.R., Finkelstein, N., 2007. Modelling the intra-urban variability of ambient traffic pollution in Toronto, Canada. Journal of Toxicology and Environmental Health. 70: 00-212.

  70. Arain, M.A., Yaun F., Black T.A., 2006: Soil–plant nitrogen cycling modulated carbon exchanges in a western temperate conifer forest in Canada. Agricultural and Forest Meteorology 140:171-192.

  71. Coursolle, C., Margolis, H.A., Barr, A.G., Black, T.A., Amiro, B.D., McCaughey J.H, Flanagan L.B., Lafleur P.M., Roulet N.T., Bourque C. P-A.., Arain M.A., Wofsy S.C., Dunn A., Morgenstern K., Orchansky A.L. Bernier P.Y., Chen J.M., Kidston J., Saigusa N., Hedstrom N, 2006. Late-summer carbon fluxes from Canadian forests and peatlandsalong an east-west continental transect. Canadian Journal of Forest Research. 36(3): 783-800.

  72. Grant R.F., Zhang Y., Yuan F., Wang, S., Hanson P.J., Chen J., Black T.A., Barr A., Baldocchi D.D., Arain A., Intercomparison of techniques to model water stress effects on CO2 and energy exchange in temperate and boreal deciduous forests. Ecosystem Modeling 196 (3-4): 289-312.

  73. Khomik, M., Arain M.A., and McCaughey J.H., 2006. Temporal and spatial variability of soil respiration in a boreal mixedwood forest. Agricultural and Forest Meteorology, 140: 244-256.

  74. Peichl M., and Arain, M.A., 2006. Above- and belowground ecosystem biomass and carbon pools in an age-sequence of temperate pine plantation forests Agricultural and Forest Meteorology 140: 51-63.

  75. McCaughey J.H., Pejam M.R., Arain M.A., Cameron D.A, 2006. Carbon dioxide and energy fluxes from a boreal mixedwood forest ecosystem in Ontario, Canada. Agricultural and Forest Meteorology, 140: 79-96.

  76. Pejam M.R., A. Arain and J.H. McCaughey. 2006. Energy and water vapour exchanges over a mixedwood boreal forest in Ontario, Canada. Hydrological Processes, 20: 3709-3724.

  77. Sahsuvaroglu, T., Arain M.A., Beckerman B’, Kanaroglou P., Brook J. Finkelstein N., Finkelstein M., Gilbert N., Newbold B., Jerrett J. 2006. A Land-Use Regression Model for Predicting Ambient Concentrations of Nitrogen Dioxide in Hamilton, Canada. Journal of the Air and Waste Management Association, 56:1059–1069.

  78. Schwalm, C.R., Black, T.A., Amiro, B.D., Arain, M.A., Barr, A.G., Bourque, C. P.-A., Dunn, A.L., Flanagan, L.B., Giasson, M.-A., Lafleur, P.M., Margolis, H.A., J.H., Orchansky, A.L., Wofsy, S.C., 2006. Photosynthetic light use efficiency of three biomes across an east–west continental-scale transect in Canada. Agricultural and Forest Meteorology, 140: 269-286.

  79. Yi, S., A. Arain, and M. Woo (2006), Modifications of a land surface scheme for improved simulation of ground freeze-thaw in northern environments, Geophysical Reseach Letters 33: L13501, doi:10.1029/2006GL026340.

  80. Arain, M.A. and Restrepo-Coupe N., Net Ecosystem Production in an Eastern White Pine plantation in southern Canada. Agricultural and Forest Meteorology, 128: 223-241.

  81. Grant R.F., Arain M.A., Arora V., Barr A., Black T.A., Chen J., Wang, S., Yuan F., Zhang Y., 2005. Modelling Temperature Effects on CO2 and Energy Exchange in Temperate and Boreal Coniferous Forests. Ecosystem Modeling 188: 217-252.

  82. Jerrett, M., Arain, M.A., Kanaroglou, P., Beckerman. , Dimitri P., Sahsuvaroglu, T., Morrison, J., Giovis, C., 2005. A review and evaluation of intra-urban air pollution exposure models. Journal of Exposure Analysis and Environmental Epidemiology, 15: 185-204.

  83. Kanaroglou, P., M. Jerrett, J. Morrison, B. Beckerman, A. Arain, N. Gilbert, J. Brook. 2005. Establishing an air pollution monitoring network for intra-urban population exposure assessment: a location-allocation approach. Atmospheric Environment. 39:2399-2409.

  84. Kothavala Z., Arain M.A., Black T.A., and Verseghy D., 2005. Evaluating fluxes of energy, water vapour and carbon dioxide over common crops. Agricultural and Forest Meteorology 133: 89-108.

  85. Restrepo N. and Arain M.A., Energy and water exchanges from a temperate pine forest. Hydrological Processes, 19-27-59.

  86. Woo, M.K., Arain, M.A. , Mollinga, M., and Yi, S., A Two-directional freeze and thaw algorithm for hydrologic models and Land Surface Schemes. Geophysical Research Letters, VOL. 31, L12501, doi:10.1029/2004GL019475, 2004.

  87. Rao, P.L.S., Mohanty, U.C., Raju, P.V.S. and Arain M.A., 2004. The vorticity and angular momentum budgets of Asian summer monsoon. Earth Planet. Science, 113 (3): 281-298.

  88. Arain M.A., Black, T.A., Barr, A.G., Griffis, T.J., Morgenstern, K and Nesic, Z., 2003. Year round observations of the energy and water vapour fluxes above a boreal black spruce forest. Hydrological Processes, 17: 3581-3600.

  89. Arain, M.A., Black T.A., Barr A.G., Jarvis, P.G., Massheder J.M., VerseghyL. and Nesic Z., 2002: Effects of seasonal and interannual climate variability on net ecosystem productivity of boreal deciduous and conifer forests. Canadian Journal of Forest Research, 32: 878-891.

  90. Arain, M.A., Shuttleworth, W.J., Blake F., Adams, J., and Omer L. Sen, 2000: Comparing micrometeorology of rainforests in Biosphere-2 and Amazon basin. Agricultural and Forest Meteorology, 100: 273-289.

  91. Black, T.A., Chen, W.J., Barr, A.G., Arain. M.A., Chen, Z, Nesic, Z., Hogg, E.H., Neumann, H.H., and Yang,m P.C., 2000. Increased carbon sequestration by a boreal deciduous forest in years with warm spring. Geophysical Research Letters, 27(9): 1271-1274.

  92. Burke, E.J., Shuttleworth, W.J., Yang, Z-L., Mullen, S.L., and Arain, M.A., 2000: Impact of heterogeneous vegetation on the modeled large-scale circulation in CCM3-BATS. Geophysical Research Letters, 27(3): 397-400.

  93. Arain, M.A., Burke, E.J., Yang, Z-L., and Shuttleworth, W.J., 1999: Implementing surface parameter aggregation rules in the CCM3 global climate model: regional response at the land surface. Hydrology and Earth System Sciences, 3(4): 463-476.

  94. Arain, M.A., Shuttleworth, W.J., Yang, Z-L., Michaud, J.D., and Dolman, A.J., 1997: Mapping surface cover parameters using aggregation rules and remotely sensed cover classes, Quarterly Journal of the Royal Meteorological Society, 123: 2325-2348.

  95. Shuttleworth, W.J., Yang, Z-L., and Arain, M.A., 1997: Aggregation rules for surface parameters in global models, Hydrology and Earth System Sciences, 2: 217-226.

  96. Unland, E.H., Arain, M.A., Harlow, C., Houser, P.R., Garatuza, J., Scott, P., Sen, O., and Shuttleworth, W.J., 1997: Evaporation from a riparian system in a semi-arid environment. Hydrological Processes, 12: 527-542.

  97. White, C.B., Houser P.R., Arain, A.M., Yang Z.L., Syed, K., and Shuttleworth W.J., 1997: The aggregate description of semi-arid vegetation with precipitation-generated soil moisture heterogeneity. Hydrology and Earth System Sciences, 1: 205-212.

  98. Arain, M.A., Michaud, J.D., Shuttleworth, W.J., and Dolman, A.J., 1996: Testing of vegetation parameter aggregation rules applicable to the Biosphere-Atmosphere Transfer Scheme (BATS) at the FIFE site, Journal of Hydrology, 177: 1-22.

 

Peer-Reviewed Synthesis Papers

(Following papers used flux data from Turkey Point Flux Station sites or data simulated by the CLASS-CN or CLASS-CTEM-N+ models).

  1. Verma M, Friedl MA, Richardson AD, Kiely G, Cescatti A, Law BE, Wohlfahrt G, Gielen B, Roupsard O, Moors EJ, Toscano P, Vaccari FP, Gianelle D, Bohrer G, Varlagin A, Buchmann N, van Gorsel E, Montagnani L, Propastin P, 2014. Remote sensing of annual terrestrial gross primary productivity from MODIS: an assessment using the FLUXNET La Thuile data set. Biogeosciences, 11, 2185–2200, doi: 10.5194/bg-11-2185-2014

  2. Raczka B.M., Davis K.J., Huntzinger D., Neilson R.P., Poulter B., Richardson A.D., Xiao J., Baker I., Ciais P., Keenan T.F., Law B., Post W.M., Ricciuto D., Schaefer K., Tian H., Tomelleri E., Verbeeck H., and Viovy N., 2013. Evaluation of continental carbon cycle simulations with North American flux tower observations. Ecological Monographs 83:531–556. http://dx.doi.org/10.1890/12-0893.1

  3. Huntzinger, D. N., Schwalm, C., Michalak, A. M., Schaefer, K., King, A. W., Wei, Y., Jacobson, A., Liu, S., Cook, R. B., Post, W. M., Berthier, G., Hayes, D., Huang, M., Ito, A., Lei, H., Lu, C., Mao, J., Peng, C. H., Peng, S., Poulter, B., Riccuito, D., Shi, X., Tian, H., Wang, W., Zeng, N., Zhao, F., and Zhu, Q., 2013. The North American Carbon Program Multi-Scale Synthesis and Terrestrial Model Intercomparison Project – Part 1: Overview and experimental design, Geoscientific Model Development, 6: 2121-2133, doi:10.5194/gmd-6-2121-2013.

  4. Keenan, T.F., Hollinger D.Y., Bohrer G., Dragoni D., Munger J.W., Schmid H.P., Richardson A.D., 2013. Increase in forest water-use efficiency as atmospheric carbon dioxide concentrations rise. Nature 324–327. doi:10.1038/nature12291.

  5. Durocher G., Caffrey J.M., Cescatti A., Dossena M., Giorgio P. D., Gasol J.M., Montoya J.M., Pumpanen J., Staehr P.A., Trimmer M., Woodward G., Allen A.P., 2012. Reconciling the temperature dependence of respiration across timescales and ecosystem types. Nature. doi:10.1038/nature1120.

  6. Lasslop, G., Migliavacca, M., Bohrer, G., Reichstein, M., Bahn, M., Ibrom, A., Jacobs, C., Kolari, P., Papale, D., Vesala, T., Wohlfahrt, G., and Cescatti, A., 2012. On the choice of the driving temperature for eddy-covariance carbon dioxide flux partitioning, Biogeosciences , 9, 9829-9873, doi:10.5194/bgd-9-9829-2012.

  7. Groenendijk M., Dolman A.J., van der Molen M-K., Arneth A., Delpierr N., Gash J.H.C., Leuning R., Lindroth A., Richardson A.D., Verbeeck H., Wohlfahrt G., 2011. Assessing parameter variability in a photosynthesis model within and between plant functional types using global Fluxnet eddy covariance data. Agricultural Forest Meteorology. 151: 22–38. doi:10.1016/j.agrformet.2010.08.013

  8. Lasslop G., Reichstein M., Papale D., Richardson A.D., Arneth A., Barr A., Stoy P., Wohlfahrt G., Separation of net ecosystem exchange into assimilation and respiration using a light response curve approach: critical issues and global evaluation. Global Change Biology 16:187-208, doi: 10.1111/j.1365-2486.2009.02041.x

  9. Teuling, A. J., M. Hirschi, A. Ohmura, Wild, M. Reichstein,  P. Ciais, N. Buchmann,  C. Ammann,  L. Montagnani,  A. D. Richardson,  G. Wohlfahrt, and S. I. Seneviratne, 2009. A regional perspective on trends in continental evaporation, Geophysical Research Letters., 36, L02404, doi:10.1029/2008GL036584.

  10. Groenendijk M., van der Molen M.K., Dolman A.J., 2009. Seasonal variation in ecosystem parameters derived from FLUXNET data. Biogeosciences Discussion, 6, 2863–2912.

  11. Piao S., Ciais P., Friedlingstein P., Peylin P., Reichstein M., Luyssaert S.,Margolis H., Fang J., Barr A., Chen A., Grelle A., Hollinger D., Laurila T., Lindroth A., Richardson A. Vesala T., 2008. Net carbon dioxide losses of northern ecosystems in response to autumn warming. Nature, Vol 451, 3. doi:10.1038/nature06444.

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